{
  "_id": "6aca5a78fe5cc25786e87b70",
  "Package": "joinet",
  "Version": "1.0.0",
  "Title": "Penalised Multivariate Regression ('Multi-Target Learning')",
  "Description": "Implements penalised multivariate regression (i.e., for\nmultiple outcomes and many features) by stacked generalisation\n(<doi:10.1093/bioinformatics/btab576>). For positively\ncorrelated outcomes, a single multivariate regression is\ntypically more predictive than multiple univariate regressions.\nIncludes functions for model fitting, extracting coefficients,\noutcome prediction, and performance measurement. For optional\ncomparisons, install 'remMap' from GitHub\n(<https://github.com/cran/remMap>).",
  "Authors@R": "person(given=\"Armin\",family=\"Rauschenberger\",email=\"armin.rauschenberger@uni.lu\",role=c(\"aut\",\"cre\"),comment=c(ORCID=\"0000-0001-6498-4801\"))",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.3.2",
  "URL": "https://github.com/rauschenberger/joinet,\nhttps://rauschenberger.github.io/joinet/",
  "BugReports": "https://github.com/rauschenberger/joinet/issues",
  "Repository": "https://rauschenberger.r-universe.dev",
  "Date/Publication": "2024-09-27 06:01:46 UTC",
  "RemoteUrl": "https://github.com/rauschenberger/joinet",
  "RemoteRef": "HEAD",
  "RemoteSha": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-10 14:39:15 UTC",
    "User": "root"
  },
  "Author": "Armin Rauschenberger [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6498-4801>)",
  "Maintainer": "Armin Rauschenberger <armin.rauschenberger@uni.lu>",
  "_user": "rauschenberger",
  "_type": "src",
  "_file": "joinet_1.0.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/644f4539395e18b1cb81261987fbbaf1814cbc96a42f159c8c6c7e67c11d4dcf",
  "_filesize": 187117,
  "_sha256": "644f4539395e18b1cb81261987fbbaf1814cbc96a42f159c8c6c7e67c11d4dcf",
  "_expires": "2027-01-18T15:32:06.000Z",
  "_created": "2026-10-10T14:39:15.000Z",
  "_published": "2026-10-10T15:32:08.551Z",
  "_buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 114237585391,
      "time": 137,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11672888042"
    },
    {
      "job": 114237585269,
      "time": 135,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11672324229"
    },
    {
      "job": 114237585255,
      "time": 144,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11673583793"
    },
    {
      "job": 114237585339,
      "time": 225,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11673624648"
    },
    {
      "job": 114236902467,
      "time": 208,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11672164520"
    },
    {
      "job": 114237585256,
      "time": 103,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11673296144"
    },
    {
      "job": 114237585278,
      "time": 86,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "11672374261"
    },
    {
      "job": 114237585347,
      "time": 94,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "11672956530"
    },
    {
      "job": 114237585281,
      "time": 91,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11672409142"
    }
  ],
  "_upstream": "https://github.com/rauschenberger/joinet",
  "_commit": {
    "id": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
    "author": "Armin <armin.rauschenberger@ext.uni.lu>",
    "committer": "Armin <armin.rauschenberger@ext.uni.lu>",
    "message": "add single quotes\n",
    "time": 1727416906
  },
  "_maintainer": {
    "name": "Armin Rauschenberger",
    "email": "armin.rauschenberger@uni.lu",
    "login": "rauschenberger",
    "orcid": "0000-0001-6498-4801",
    "description": "",
    "uuid": 14272654
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.0.0",
      "role": "Depends"
    },
    {
      "package": "glmnet",
      "role": "Imports"
    },
    {
      "package": "palasso",
      "role": "Imports"
    },
    {
      "package": "cornet",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "MASS",
      "role": "Suggests"
    },
    {
      "package": "mice",
      "role": "Suggests"
    },
    {
      "package": "earth",
      "role": "Suggests"
    },
    {
      "package": "spls",
      "role": "Suggests"
    },
    {
      "package": "MRCE",
      "role": "Suggests"
    },
    {
      "package": "remMap",
      "role": "Suggests"
    },
    {
      "package": "MultivariateRandomForest",
      "role": "Suggests"
    },
    {
      "package": "SiER",
      "role": "Suggests"
    },
    {
      "package": "mcen",
      "role": "Suggests"
    },
    {
      "package": "GPM",
      "role": "Suggests"
    },
    {
      "package": "RMTL",
      "role": "Suggests"
    },
    {
      "package": "MTPS",
      "role": "Suggests"
    }
  ],
  "_owner": "rauschenberger",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [],
  "_tags": [],
  "_stars": 4,
  "_contributors": [
    {
      "user": "rauschenberger",
      "count": 121,
      "uuid": 14272654
    }
  ],
  "_userbio": {
    "uuid": 14272654,
    "type": "user",
    "name": "Armin Rauschenberger",
    "followers": 10
  },
  "_downloads": {
    "count": 359,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/joinet"
  },
  "_devurl": "https://github.com/rauschenberger/joinet",
  "_pkgdown": "https://rauschenberger.github.io/joinet/",
  "_searchresults": 11,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/joinet.html",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/rauschenberger/joinet",
  "_realowner": "rauschenberger",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0.1",
      "date": "2019-08-03"
    },
    {
      "version": "0.0.2",
      "date": "2019-08-08"
    },
    {
      "version": "0.0.3",
      "date": "2019-11-13"
    },
    {
      "version": "0.0.5",
      "date": "2020-10-03"
    },
    {
      "version": "0.0.6",
      "date": "2020-11-23"
    },
    {
      "version": "0.0.7",
      "date": "2021-03-09"
    },
    {
      "version": "0.0.8",
      "date": "2021-07-16"
    },
    {
      "version": "0.0.9",
      "date": "2021-07-16"
    },
    {
      "version": "0.0.10",
      "date": "2021-08-09"
    },
    {
      "version": "1.0.0",
      "date": "2024-09-27"
    }
  ],
  "_exports": [
    "cv.joinet",
    "joinet"
  ],
  "_help": [
    {
      "page": "joinet-package",
      "title": "Multivariate Elastic Net Regression",
      "topics": [
        "joinet-package"
      ]
    },
    {
      "page": "coef.joinet",
      "title": "Extract Coefficients",
      "topics": [
        "coef.joinet"
      ]
    },
    {
      "page": "cv.joinet",
      "title": "Model comparison",
      "topics": [
        "cv.joinet"
      ]
    },
    {
      "page": "joinet",
      "title": "Multivariate Elastic Net Regression",
      "topics": [
        "joinet"
      ]
    },
    {
      "page": "predict.joinet",
      "title": "Make Predictions",
      "topics": [
        "predict.joinet"
      ]
    },
    {
      "page": "weights.joinet",
      "title": "Extract Weights",
      "topics": [
        "weights.joinet"
      ]
    }
  ],
  "_readme": "https://github.com/rauschenberger/joinet/raw/HEAD/README.md",
  "_rundeps": [
    "codetools",
    "cornet",
    "foreach",
    "glmnet",
    "iterators",
    "lattice",
    "Matrix",
    "palasso",
    "Rcpp",
    "RcppEigen",
    "shape",
    "survival"
  ],
  "_vignettes": [
    {
      "source": "script.Rmd",
      "filename": "script.html",
      "title": "Multivariate Elastic Net Regression",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Simulation",
        "Application"
      ],
      "created": "2020-12-01 08:45:11",
      "modified": "2021-07-14 13:58:11",
      "commits": 6
    },
    {
      "source": "article.Rmd",
      "filename": "article.html",
      "title": "Multivariate Elastic Net Regression",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Predicting correlated outcomes from molecular data",
        "Abstract",
        "Full text (open access)"
      ],
      "created": "2019-03-18 09:53:02",
      "modified": "2024-09-27 06:01:12",
      "commits": 15
    },
    {
      "source": "vignette.Rmd",
      "filename": "vignette.html",
      "title": "Multivariate Elastic Net Regression",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Installation",
        "Initialisation",
        "Simulation",
        "Application",
        "Reference"
      ],
      "created": "2018-06-14 09:52:44",
      "modified": "2024-09-27 06:01:12",
      "commits": 37
    }
  ],
  "_score": 5.296665190261531,
  "_indexed": true,
  "_nocasepkg": "joinet",
  "_universes": [
    "rauschenberger"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-10-10T14:41:32.000Z",
      "distro": "resolute",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/e09b4af05257b6fee4d45b1625064a147ea67c1bd1fbf90f8397aeab2f093135",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-10-10T14:41:31.000Z",
      "distro": "resolute",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/1120d06f2479daaf48a07928ca33fda784802d6f8abf4ebd052e8c212714aa85",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-10-10T15:22:02.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/1d7d4450e3c0c8745ceec69489cce3f9cb9329f453cb7b110ef2a73a0ab0db96",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-10-10T15:30:35.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/c2dc52bf147ed14186e31799f262c546b84bcb5c7849762fc183204a27922cfa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.0",
      "date": "2026-10-10T14:41:18.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/65176600066125a089b5af96c6172f00512a4f17c7aeb78417f05b83c3d436ab",
      "status": "success",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-10T14:40:42.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/3bfc49b5b6e33a77f1e50e0f390981bd47f955bbc7b266eee86698c634b3f2a3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-10T14:40:44.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/a76a241a89dfa713458ff54209ec6a498974f48f5bf07bb4fa56b571d5a436ce",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-10T14:40:39.000Z",
      "commit": "d5f0b581288f0231a6c9d5e4d1d7de3a412a1aa9",
      "fileid": "https://r2.ropensci.org/080d8b4947ff0be42e6faaf066bfd199e455da9416d7b3fc6747d19de6bc81c4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/rauschenberger/actions/runs/38060234032"
    }
  ]
}